Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015809935.1_cds_XP_016496010.1_10274
CDS Infomation

[gene=LOC107815016] [db_xref=GeneID:107815016] [protein=H/ACA ribonucleoprotein complex subunit 1-like isoform X2] [protein_id=XP_016496010.1] [location=complement(join(32398..32571,33770..33817,33922..34080,34457..34589,34907..35228,36489..36657))] [gbkey=CDS]
Sequence

ATGGCAACTTTGAACCCATTTGACCTTCTCGATGACGATGCTGAGGACCCAAGCTTGTTA
ATTGCTGCTGAGCAGCAAAAACAGGTTCCTCCTCCTGCTTCTGTTCCAAAGAAGGGACCT
GCTCAACAATCTAAGCCTGCTGCTAAGCCCCTCCCTCCATCCGAGGCTGTGAGGGAAGCC
AGGAATGATGGCCAGCGTGGAGGAGGCCGTGGGGGTCCACGCGGAGGATTTGGTGGCCGC
GGTCGTGGCCGTGGGTTTAGCCAATATCCTGCTGATGGTGAGAATACTTTTGGCAGCAGT
AATGGGTTCTCTGGAGGGTACAAAGCTTCAGAAGATGGAGAGTCAGGGAAGCACTCCGAA
AGGAGAGTTGGATATGGAGGACCTCGTGGGGAGTTCCGCGGTGGCCGCCGTGGTGGTTTC
AGCAACGGTGACGCTGCAGATGGTGAACGCCCCAGGAGAGCGTTTGAGCGACGAAGTGGA
ACTGGACGTGGGGAGAAAGAAGAGCCTGTTAATGAGGGAGAGAAGATTGTTGTTACCGAG
AAACAAGCAGTGCAGGCAGATGCTGAAGACGCAAGCAAGGACTCTCCTGCAGCTGAGCCA
CAGGAGAAGGAACCTGAGGAGAAGGAAATGACCCTAGAAGAGTATGAGAAGTTATTGGAA
GAGAAGAGGAAAGCTTTGTTGGCTCTAAAGCCTGAGGAAAGAAAGGTCAATTTGGACAAA
GAGCTTGAGTCCATGCAACTTCTGTCAAACAAGAAAAGTGATGATGAGGTTTTCATTAAA
TTGGGTTCTGAGAAAGACAAGCGTAAGGAGGCAGTGGAAAAGGCCAAGAAGACAAAAAGC
ATTAACGAGTTTCTGAAGCCTGCTGATGGAGAAAGTTACTATGGCCGAGGTGGCCGTGGA
AGGGGGGGACGTGATCGTGGGAGAGATGGTTTTGTTGGTAACAACAGTGTTTCAGCACCA
TCCATTGAAGATGTTCGCCAGTTCCCTTCTTTGGGTGCAAAGTAA

Peptide Sequence

PEP ID

XP_016496010.1
PEP Infomation

PREDICTED: H/ACA ribonucleoprotein complex subunit 1-like isoform X2 [Nicotiana tabacum]
Sequence

MATLNPFDLLDDDAEDPSLLIAAEQQKQVPPPASVPKKGPAQQSKPAAKPLPPSEAVREA
RNDGQRGGGRGGPRGGFGGRGRGRGFSQYPADGENTFGSSNGFSGGYKASEDGESGKHSE
RRVGYGGPRGEFRGGRRGGFSNGDAADGERPRRAFERRSGTGRGEKEEPVNEGEKIVVTE
KQAVQADAEDASKDSPAAEPQEKEPEEKEMTLEEYEKLLEEKRKALLALKPEERKVNLDK
ELESMQLLSNKKSDDEVFIKLGSEKDKRKEAVEKAKKTKSINEFLKPADGESYYGRGGRG
RGGRDRGRDGFVGNNSVSAPSIEDVRQFPSLGAK

Transcript Sequence

Gene sequence data has not been registered.